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Board Thread:Series general discussion/@comment-2112031-20151005125649/@comment-6517-20151005151116
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Check out their article here; it answers most of your questions.
Simply put, the First Civilisation are a kind of 'version 1 human', becoming the planet's dominant species in their era, like humans have become in ours. As for your theory about evolving from apes, I can tell you that that is certainly **not** the case.
The First Civilisation artificially altered the DNA of a pre-existing species (primates) in order to create both Homo Sapiens and Homo Neanderthalensis, who they then used as a workforce, and military outfit respectively.